The Author is able to upload the Supplementary Files in Step 4 of the Submission Process. The Supplementary Files are intended to include research data sets. How do I get a 20% discount on the Article Processing Fee if my protocol was previously published in JMIR Research Protocols? You should leave figures in the manuscript file during the initial round(s) of peer-review, but also upload high-quality figures in PNG format as. Thank you for submitting your manuscript to JDR. This page allows you to add a Supplementary File to that submission. Please read and follow the advice given.
Furthermore, cross-referencing prior works is a vital component of the scientific endeavor, yet many scientists' contributions go unrecognized, buried deeply in supplementary files and not tracked by citation indices. This situation disproportionately affects scientists developing the analytical methods that have, in many respects, made the current scientific revolution possible. Authors, reviewers, and journals alike must ensure the adequate acknowledgment, within every scientific article, of all prior work relevant to the study being published.
The ubiquitous use of electronic media in modern scientific publishing provides an opportunity for the better integration of supplementary material with the primary article. Specifically, we propose that supplementary items, irrespective of format, be directly hyper-linked from the text itself. Such references should be to specific sections of the supplementary material rather than the full supplementary text. Mechanisms for providing such links are available in virtually all commonly used word processors, as well as in the commonly used display media HTML, PDF, etc.
The availability of the supplementary information just 'one click away' would not only dramatically improve the utility of published scientific articles, but also increase the likelihood that supplementary material are adequately evaluated during the review process.
Some journals have already taken steps towards providing a rich interface to their articles, and in many cases the supplementary tables, figures, or other media are appropriately hyperlinked directly from the manuscript.
In PNAS, for example, online articles are presented in a feature-rich format that includes several useful interactive items: In most other journals supplementary material must be downloaded separately.
In addition, we believe that removing arbitrary article size limits, at least for the online versions of articles, would have an important impact on removing the artificial distinction between supplementary material and the main manuscript text. An interesting compromise in this direction is exemplified by Nature Methods , where articles are accompanied by an Online Methods section that appears in both the online version of the article and the downloaded PDF.
In our discussion above we have singled out two manuscripts published in Science , primarily because Science is one of the few journals that provides clear instructions to authors and reviewers on supplementary material, yet articles published in this journal frequently overuse supplements.
A more extensive analysis of supplementary materials across journals is beyond the scope of this editorial, however interested readers can examine such an analysis recently done for environmental science journals [ 5 ], as well as our own survey of 70 highly cited genomics papers from 7 different journals Additional file 1: Given the extensive use of supplementary material, and the potential harm it poses to science, it is critical that all scientific journals develop clear and consistent policies on the use and review of supplementary material.
Some initial recommendations on the use of supplementary material were recently outlined in a report of the National Information Standards Organization and the National Federation of Advanced Information Services [ 8 ], but these recommendations still need to be implemented and refined to ensure the ethical and consistent use of supplementary material in our discipline.
We hope our paper will motivate scientists and publishers to enact desperately needed changes in the way supplementary materials are evaluated and used in scientific publishing. Spreadsheet containing summary statistics about supplementary material use in 7 scientific journals.
Data is presented for 10 genomics papers from each journal selected based on their number of citations during — This paper was inspired by a spirited discussion with Julien Tap. National Center for Biotechnology Information , U.
Published online Nov 3. Mihai Pop and Steven L. Author information Article notes Copyright and License information Disclaimer. Received Jul 8; Accepted Jul 9. This article has been cited by other articles in PMC. Associated Data Supplementary Materials Additional file 1: Abstract Supplementary material is a ubiquitous feature of scientific articles, particularly in journals that limit the length of the articles. Electronic supplementary material The online version of this article doi: Introduction Supplementary material is ubiquitous in scientific papers.
Why is supplementary material needed? Why is it a problem? Is supplementary material being reviewed? Is supplementary material easy to use? A way forward The situation outlined above is simply unacceptable in today's technologically-advanced world. Additional file Additional file 1: Acknowledgments This paper was inspired by a spirited discussion with Julien Tap. Step 1 ensures that the Author understands the journal's submission rules.
If you need any help the journal's technical support contact is provided at the top of this page. First, if the journal charges submission fees , these will be presented to the author. If the journal does not charge submission fees, this section will not appear. Next, the author must check each of the items from the submission checklist.
These items were established in Journal Setup Step 3. The journal's copyright policy will appear next, and, if configured as a requirement, the author will need to agree to this policy.
If the journal has not added a Copyright Notice , this section will not appear. Authors can then review the Privacy Statement. If the journal has not added a Privacy Statement , this section will not appear. Finally, the author can add any comments, which will be visible to the editor. Move to the next step by hitting the Save and Continue button. Submission Step Two allows you to upload the submission file, typically a word-processing document. Click Browse to open a Choose File window for locating the file on the hard drive of your computer.
Click Open on the Choose File window, which places the name of the file on this page. Click Upload on this page, which uploads the file from the computer to the journal's web site and renames it following the journal's conventions. Once the submission is uploaded, click Save and continue. The third step of the submission process serves to collect all relevant metadata from the author. The first section of metadata covers the authors. The submitting author will have their personal information automatically appear.
Any additional information, such as Competing Interests should also be added at this time, if required. If there are multiple authors for the submission, their information can be added using the Add Author button. You can also re-order the list of authors, make one of the authors the principal contact with the editor, and delete any authors added in error. You will then add indexing information. This will help others find your article.
The suggested indexing options were determined by the Journal Manager in Setup Step 3. The final section allows you to enter the name of any organization that may have supported your research. This step is optional.
If you have any supplementary files, such as research instruments, data sets, etc. These files are also indexed by the author, identifying their relation to the submission, as well as their ownership. Supplementary Files can be uploaded in any file format and will be made available to readers in their original format. Once the submission is uploaded, click Save and Continue. Oxford University Press is a department of the University of Oxford.
It furthers the University's objective of excellence in research, scholarship, and education by publishing worldwide. Sign In or Create an Account. Supplementary Data Guidelines Supplementary Data is supporting material that cannot be included in the printed version for reasons of space, and that is not essential for inclusion in the full text of the manuscript but would nevertheless benefit the reader.
Provide text files in Portable Document Format. Provide spreadsheet files in Microsoft Excel. Provide image files as Tagged Image Format. Images should be a maximum size of x pixels 9 x 6.
The most commonly accessible format for audio clips is.
Use and mis-use of supplementary material in science publications
This step is optional. If you have any supplementary files, such as research instruments, data sets, etc., you may add them here. These files are also indexed by. Supplementary files will be uploaded as supplied. They will not be checked for accuracy, copyedited, typeset or proofread. The responsibility for scientific. SAGE will not host codec files, or be responsible for supporting video supplemental material where the.